Ginkgo  Generated from pipelines/1478841010 branch based on develop. Ginkgo version 1.9.0
A numerical linear algebra library targeting many-core architectures
coo.hpp
1 // SPDX-FileCopyrightText: 2017 - 2024 The Ginkgo authors
2 //
3 // SPDX-License-Identifier: BSD-3-Clause
4 
5 #ifndef GKO_PUBLIC_CORE_MATRIX_COO_HPP_
6 #define GKO_PUBLIC_CORE_MATRIX_COO_HPP_
7 
8 
9 #include <ginkgo/core/base/array.hpp>
10 #include <ginkgo/core/base/lin_op.hpp>
11 
12 
13 namespace gko {
19 namespace matrix {
20 
21 
22 template <typename ValueType, typename IndexType>
23 class Csr;
24 
25 template <typename ValueType>
26 class Dense;
27 
28 template <typename ValueType, typename IndexType>
29 class CooBuilder;
30 
31 template <typename ValueType, typename IndexType>
32 class Hybrid;
33 
34 
49 template <typename ValueType = default_precision, typename IndexType = int32>
50 class Coo : public EnableLinOp<Coo<ValueType, IndexType>>,
51  public ConvertibleTo<Coo<next_precision<ValueType>, IndexType>>,
52  public ConvertibleTo<Csr<ValueType, IndexType>>,
53  public ConvertibleTo<Dense<ValueType>>,
54  public DiagonalExtractable<ValueType>,
55  public ReadableFromMatrixData<ValueType, IndexType>,
56  public WritableToMatrixData<ValueType, IndexType>,
58  remove_complex<Coo<ValueType, IndexType>>> {
59  friend class EnablePolymorphicObject<Coo, LinOp>;
60  friend class Csr<ValueType, IndexType>;
61  friend class Dense<ValueType>;
62  friend class CooBuilder<ValueType, IndexType>;
63  friend class Coo<to_complex<ValueType>, IndexType>;
64  friend class Hybrid<ValueType, IndexType>;
65 
66 public:
69  using ConvertibleTo<Coo<next_precision<ValueType>, IndexType>>::convert_to;
70  using ConvertibleTo<Coo<next_precision<ValueType>, IndexType>>::move_to;
71  using ConvertibleTo<Csr<ValueType, IndexType>>::convert_to;
73  using ConvertibleTo<Dense<ValueType>>::convert_to;
74  using ConvertibleTo<Dense<ValueType>>::move_to;
76 
77  using value_type = ValueType;
78  using index_type = IndexType;
81  using absolute_type = remove_complex<Coo>;
82 
83  friend class Coo<next_precision<ValueType>, IndexType>;
84 
85  void convert_to(
86  Coo<next_precision<ValueType>, IndexType>* result) const override;
87 
88  void move_to(Coo<next_precision<ValueType>, IndexType>* result) override;
89 
90  void convert_to(Csr<ValueType, IndexType>* other) const override;
91 
92  void move_to(Csr<ValueType, IndexType>* other) override;
93 
94  void convert_to(Dense<ValueType>* other) const override;
95 
96  void move_to(Dense<ValueType>* other) override;
97 
98  void read(const mat_data& data) override;
99 
100  void read(const device_mat_data& data) override;
101 
102  void read(device_mat_data&& data) override;
103 
104  void write(mat_data& data) const override;
105 
106  std::unique_ptr<Diagonal<ValueType>> extract_diagonal() const override;
107 
108  std::unique_ptr<absolute_type> compute_absolute() const override;
109 
110  void compute_absolute_inplace() override;
111 
117  value_type* get_values() noexcept { return values_.get_data(); }
118 
126  const value_type* get_const_values() const noexcept
127  {
128  return values_.get_const_data();
129  }
130 
136  index_type* get_col_idxs() noexcept { return col_idxs_.get_data(); }
137 
145  const index_type* get_const_col_idxs() const noexcept
146  {
147  return col_idxs_.get_const_data();
148  }
149 
155  index_type* get_row_idxs() noexcept { return row_idxs_.get_data(); }
156 
164  const index_type* get_const_row_idxs() const noexcept
165  {
166  return row_idxs_.get_const_data();
167  }
168 
175  {
176  return values_.get_size();
177  }
178 
190 
195 
206  ptr_param<LinOp> x);
207 
212  ptr_param<LinOp> x) const;
213 
223  static std::unique_ptr<Coo> create(std::shared_ptr<const Executor> exec,
224  const dim<2>& size = dim<2>{},
225  size_type num_nonzeros = {});
226 
247  static std::unique_ptr<Coo> create(std::shared_ptr<const Executor> exec,
248  const dim<2>& size,
249  array<value_type> values,
250  array<index_type> col_idxs,
251  array<index_type> row_idxs);
252 
257  template <typename InputValueType, typename InputColumnIndexType,
258  typename InputRowIndexType>
259  GKO_DEPRECATED(
260  "explicitly construct the gko::array argument instead of passing "
261  "initializer lists")
262  static std::unique_ptr<Coo> create(
263  std::shared_ptr<const Executor> exec, const dim<2>& size,
264  std::initializer_list<InputValueType> values,
265  std::initializer_list<InputColumnIndexType> col_idxs,
266  std::initializer_list<InputRowIndexType> row_idxs)
267  {
268  return create(exec, size, array<value_type>{exec, std::move(values)},
269  array<index_type>{exec, std::move(col_idxs)},
270  array<index_type>{exec, std::move(row_idxs)});
271  }
272 
286  static std::unique_ptr<const Coo> create_const(
287  std::shared_ptr<const Executor> exec, const dim<2>& size,
288  gko::detail::const_array_view<ValueType>&& values,
289  gko::detail::const_array_view<IndexType>&& col_idxs,
290  gko::detail::const_array_view<IndexType>&& row_idxs);
291 
292 protected:
293  Coo(std::shared_ptr<const Executor> exec, const dim<2>& size = dim<2>{},
294  size_type num_nonzeros = {});
295 
296  Coo(std::shared_ptr<const Executor> exec, const dim<2>& size,
297  array<value_type> values, array<index_type> col_idxs,
298  array<index_type> row_idxs);
299 
307  void resize(dim<2> new_size, size_type nnz);
308 
309  void apply_impl(const LinOp* b, LinOp* x) const override;
310 
311  void apply_impl(const LinOp* alpha, const LinOp* b, const LinOp* beta,
312  LinOp* x) const override;
313 
314  void apply2_impl(const LinOp* b, LinOp* x) const;
315 
316  void apply2_impl(const LinOp* alpha, const LinOp* b, LinOp* x) const;
317 
318 private:
319  array<value_type> values_;
320  array<index_type> col_idxs_;
321  array<index_type> row_idxs_;
322 };
323 
324 
325 } // namespace matrix
326 } // namespace gko
327 
328 
329 #endif // GKO_PUBLIC_CORE_MATRIX_COO_HPP_
gko::matrix::Coo::apply2
LinOp * apply2(ptr_param< const LinOp > b, ptr_param< LinOp > x)
Applies Coo matrix axpy to a vector (or a sequence of vectors).
gko::matrix::Csr
CSR is a matrix format which stores only the nonzero coefficients by compressing each row of the matr...
Definition: matrix.hpp:27
gko::matrix::Coo::get_col_idxs
index_type * get_col_idxs() noexcept
Returns the column indexes of the matrix.
Definition: coo.hpp:136
gko::LinOp
Definition: lin_op.hpp:117
gko::matrix::Dense
Dense is a matrix format which explicitly stores all values of the matrix.
Definition: dense_cache.hpp:19
gko::DiagonalExtractable
The diagonal of a LinOp implementing this interface can be extracted.
Definition: lin_op.hpp:743
gko::matrix::Coo::read
void read(const mat_data &data) override
Reads a matrix from a matrix_data structure.
gko::matrix::Coo::compute_absolute
std::unique_ptr< absolute_type > compute_absolute() const override
Gets the AbsoluteLinOp.
gko::matrix::Coo::get_const_col_idxs
const index_type * get_const_col_idxs() const noexcept
Returns the column indexes of the matrix.
Definition: coo.hpp:145
gko::size_type
std::size_t size_type
Integral type used for allocation quantities.
Definition: types.hpp:86
gko::matrix::CooBuilder
Definition: coo.hpp:29
gko
The Ginkgo namespace.
Definition: abstract_factory.hpp:20
gko::array< value_type >
gko::dim< 2 >
gko::matrix_data
This structure is used as an intermediate data type to store a sparse matrix.
Definition: matrix_data.hpp:126
gko::matrix::Coo::get_num_stored_elements
size_type get_num_stored_elements() const noexcept
Returns the number of elements explicitly stored in the matrix.
Definition: coo.hpp:174
gko::next_precision
typename detail::next_precision_impl< T >::type next_precision
Obtains the next type in the singly-linked precision list.
Definition: math.hpp:461
gko::ptr_param
This class is used for function parameters in the place of raw pointers.
Definition: utils_helper.hpp:41
gko::matrix::Coo::write
void write(mat_data &data) const override
Writes a matrix to a matrix_data structure.
gko::array::get_data
value_type * get_data() noexcept
Returns a pointer to the block of memory used to store the elements of the array.
Definition: array.hpp:673
gko::ReadableFromMatrixData
A LinOp implementing this interface can read its data from a matrix_data structure.
Definition: lin_op.hpp:605
gko::WritableToMatrixData
A LinOp implementing this interface can write its data to a matrix_data structure.
Definition: lin_op.hpp:660
gko::matrix::Coo::get_values
value_type * get_values() noexcept
Returns the values of the matrix.
Definition: coo.hpp:117
gko::matrix::Coo::get_const_row_idxs
const index_type * get_const_row_idxs() const noexcept
Definition: coo.hpp:164
gko::ConvertibleTo
ConvertibleTo interface is used to mark that the implementer can be converted to the object of Result...
Definition: polymorphic_object.hpp:470
gko::matrix::Coo::compute_absolute_inplace
void compute_absolute_inplace() override
Compute absolute inplace on each element.
gko::Executor
The first step in using the Ginkgo library consists of creating an executor.
Definition: executor.hpp:615
gko::matrix::Hybrid
HYBRID is a matrix format which splits the matrix into ELLPACK and COO format.
Definition: coo.hpp:32
gko::matrix::Coo::extract_diagonal
std::unique_ptr< Diagonal< ValueType > > extract_diagonal() const override
Extracts the diagonal entries of the matrix into a vector.
gko::array::get_const_data
const value_type * get_const_data() const noexcept
Returns a constant pointer to the block of memory used to store the elements of the array.
Definition: array.hpp:682
gko::matrix::Coo::get_const_values
const value_type * get_const_values() const noexcept
Returns the values of the matrix.
Definition: coo.hpp:126
gko::matrix::Coo::create_const
static std::unique_ptr< const Coo > create_const(std::shared_ptr< const Executor > exec, const dim< 2 > &size, gko::detail::const_array_view< ValueType > &&values, gko::detail::const_array_view< IndexType > &&col_idxs, gko::detail::const_array_view< IndexType > &&row_idxs)
Creates a constant (immutable) Coo matrix from a set of constant arrays.
gko::EnableAbsoluteComputation
The EnableAbsoluteComputation mixin provides the default implementations of compute_absolute_linop an...
Definition: lin_op.hpp:794
gko::matrix::Coo::get_row_idxs
index_type * get_row_idxs() noexcept
Returns the row indexes of the matrix.
Definition: coo.hpp:155
gko::array::get_size
size_type get_size() const noexcept
Returns the number of elements in the array.
Definition: array.hpp:656
gko::remove_complex
typename detail::remove_complex_s< T >::type remove_complex
Obtain the type which removed the complex of complex/scalar type or the template parameter of class b...
Definition: math.hpp:325
gko::device_matrix_data
This type is a device-side equivalent to matrix_data.
Definition: device_matrix_data.hpp:36
gko::EnableLinOp
The EnableLinOp mixin can be used to provide sensible default implementations of the majority of the ...
Definition: lin_op.hpp:877
gko::matrix::Coo::create
static std::unique_ptr< Coo > create(std::shared_ptr< const Executor > exec, const dim< 2 > &size=dim< 2 >{}, size_type num_nonzeros={})
Creates an uninitialized COO matrix of the specified size.
gko::LinOp::LinOp
LinOp(const LinOp &)=default
Copy-constructs a LinOp.
gko::to_complex
typename detail::to_complex_s< T >::type to_complex
Obtain the type which adds the complex of complex/scalar type or the template parameter of class by a...
Definition: math.hpp:344
gko::EnablePolymorphicObject
This mixin inherits from (a subclass of) PolymorphicObject and provides a base implementation of a ne...
Definition: polymorphic_object.hpp:661
gko::matrix::Coo
COO stores a matrix in the coordinate matrix format.
Definition: coo.hpp:50