Ginkgo  Generated from pipelines/2837190956 branch based on develop. Ginkgo version 2.0.0
A numerical linear algebra library targeting many-core architectures
coo.hpp
1 // SPDX-FileCopyrightText: 2017 - 2026 The Ginkgo authors
2 //
3 // SPDX-License-Identifier: BSD-3-Clause
4 
5 #ifndef GKO_PUBLIC_CORE_MATRIX_COO_HPP_
6 #define GKO_PUBLIC_CORE_MATRIX_COO_HPP_
7 
8 
9 #include <ginkgo/core/base/array.hpp>
10 #include <ginkgo/core/base/lin_op.hpp>
11 #include <ginkgo/core/matrix/device_views.hpp>
12 
13 
14 namespace gko {
19 namespace matrix {
20 
21 
22 template <typename ValueType, typename IndexType>
23 class Csr;
24 
25 template <typename ValueType>
26 class Dense;
27 
28 template <typename ValueType, typename IndexType>
29 class CooBuilder;
30 
31 template <typename ValueType, typename IndexType>
32 class Hybrid;
33 
34 
48 template <typename ValueType = default_precision, typename IndexType = int32>
49 class Coo : public LinOp,
50  public EnableCloneable<Coo<ValueType, IndexType>>,
51  public ConvertibleTo<Coo<next_precision<ValueType>, IndexType>>,
52 #if GINKGO_ENABLE_HALF || GINKGO_ENABLE_BFLOAT16
53  public ConvertibleTo<Coo<next_precision<ValueType, 2>, IndexType>>,
54 #endif
55 #if GINKGO_ENABLE_HALF && GINKGO_ENABLE_BFLOAT16
56  public ConvertibleTo<Coo<next_precision<ValueType, 3>, IndexType>>,
57 #endif
58  public ConvertibleTo<Csr<ValueType, IndexType>>,
59  public ConvertibleTo<Dense<ValueType>>,
60  public DiagonalExtractable<ValueType>,
61  public ReadableFromMatrixData<ValueType, IndexType>,
62  public WritableToMatrixData<ValueType, IndexType>,
63  public Transposable,
65  remove_complex<Coo<ValueType, IndexType>>> {
66  friend class EnableCloneable<Coo>;
67  friend class Csr<ValueType, IndexType>;
68  friend class Dense<ValueType>;
69  friend class CooBuilder<ValueType, IndexType>;
70  friend class Coo<to_complex<ValueType>, IndexType>;
71  friend class Hybrid<ValueType, IndexType>;
72  GKO_ASSERT_SUPPORTED_VALUE_AND_INDEX_TYPE;
73 
74 public:
77  using ConvertibleTo<Coo<next_precision<ValueType>, IndexType>>::convert_to;
78  using ConvertibleTo<Coo<next_precision<ValueType>, IndexType>>::move_to;
79  using ConvertibleTo<Csr<ValueType, IndexType>>::convert_to;
81  using ConvertibleTo<Dense<ValueType>>::convert_to;
82  using ConvertibleTo<Dense<ValueType>>::move_to;
84 
85  using value_type = ValueType;
86  using index_type = IndexType;
90  using absolute_type = remove_complex<Coo>;
92  using const_device_view =
94 
95  friend class Coo<previous_precision<ValueType>, IndexType>;
96 
97  void convert_to(
98  Coo<next_precision<ValueType>, IndexType>* result) const override;
99 
100  void move_to(Coo<next_precision<ValueType>, IndexType>* result) override;
101 
102 #if GINKGO_ENABLE_HALF || GINKGO_ENABLE_BFLOAT16
103  friend class Coo<previous_precision<ValueType, 2>, IndexType>;
104  using ConvertibleTo<
105  Coo<next_precision<ValueType, 2>, IndexType>>::convert_to;
106  using ConvertibleTo<Coo<next_precision<ValueType, 2>, IndexType>>::move_to;
107 
108  void convert_to(
109  Coo<next_precision<ValueType, 2>, IndexType>* result) const override;
110 
111  void move_to(Coo<next_precision<ValueType, 2>, IndexType>* result) override;
112 #endif
113 
114 #if GINKGO_ENABLE_HALF && GINKGO_ENABLE_BFLOAT16
115  friend class Coo<previous_precision<ValueType, 3>, IndexType>;
116  using ConvertibleTo<
117  Coo<next_precision<ValueType, 3>, IndexType>>::convert_to;
118  using ConvertibleTo<Coo<next_precision<ValueType, 3>, IndexType>>::move_to;
119 
120  void convert_to(
121  Coo<next_precision<ValueType, 3>, IndexType>* result) const override;
122 
123  void move_to(Coo<next_precision<ValueType, 3>, IndexType>* result) override;
124 #endif
125 
126  void convert_to(Csr<ValueType, IndexType>* other) const override;
127 
128  void move_to(Csr<ValueType, IndexType>* other) override;
129 
130  void convert_to(Dense<ValueType>* other) const override;
131 
132  void move_to(Dense<ValueType>* other) override;
133 
134  void read(const mat_data& data) override;
135 
136  void read(const device_mat_data& data) override;
137 
138  void read(device_mat_data&& data) override;
139 
140  void write(mat_data& data) const override;
141 
142  std::unique_ptr<LinOp> transpose() const override;
143 
144  std::unique_ptr<LinOp> conj_transpose() const override;
145 
146  std::unique_ptr<Diagonal<ValueType>> extract_diagonal() const override;
147 
148  std::unique_ptr<absolute_type> compute_absolute() const override;
149 
150  void compute_absolute_inplace() override;
151 
157  value_type* get_values() noexcept { return values_.get_data(); }
158 
166  const value_type* get_const_values() const noexcept
167  {
168  return values_.get_const_data();
169  }
170 
176  index_type* get_col_idxs() noexcept { return col_idxs_.get_data(); }
177 
185  const index_type* get_const_col_idxs() const noexcept
186  {
187  return col_idxs_.get_const_data();
188  }
189 
195  index_type* get_row_idxs() noexcept { return row_idxs_.get_data(); }
196 
204  const index_type* get_const_row_idxs() const noexcept
205  {
206  return row_idxs_.get_const_data();
207  }
208 
215  {
216  return values_.get_size();
217  }
218 
224  device_view get_device_view();
225 
231  const_device_view get_const_device_view() const;
232 
244 
249 
260  ptr_param<LinOp> x);
261 
266  ptr_param<LinOp> x) const;
267 
268 
269  void validate_data() const override;
270 
280  static std::unique_ptr<Coo> create(std::shared_ptr<const Executor> exec,
281  const dim<2>& size = dim<2>{},
282  size_type num_nonzeros = {});
283 
304  static std::unique_ptr<Coo> create(std::shared_ptr<const Executor> exec,
305  const dim<2>& size,
306  array<value_type> values,
307  array<index_type> col_idxs,
308  array<index_type> row_idxs);
309 
314  template <typename InputValueType, typename InputColumnIndexType,
315  typename InputRowIndexType>
316  GKO_DEPRECATED(
317  "explicitly construct the gko::array argument instead of passing "
318  "initializer lists")
319  static std::unique_ptr<Coo> create(
320  std::shared_ptr<const Executor> exec, const dim<2>& size,
321  std::initializer_list<InputValueType> values,
322  std::initializer_list<InputColumnIndexType> col_idxs,
323  std::initializer_list<InputRowIndexType> row_idxs)
324  {
325  return create(exec, size, array<value_type>{exec, std::move(values)},
326  array<index_type>{exec, std::move(col_idxs)},
327  array<index_type>{exec, std::move(row_idxs)});
328  }
329 
343  static std::unique_ptr<const Coo> create_const(
344  std::shared_ptr<const Executor> exec, const dim<2>& size,
345  gko::detail::const_array_view<ValueType>&& values,
346  gko::detail::const_array_view<IndexType>&& col_idxs,
347  gko::detail::const_array_view<IndexType>&& row_idxs);
348 
349 protected:
350  Coo(std::shared_ptr<const Executor> exec, const dim<2>& size = dim<2>{},
351  size_type num_nonzeros = {});
352 
353  Coo(std::shared_ptr<const Executor> exec, const dim<2>& size,
354  array<value_type> values, array<index_type> col_idxs,
355  array<index_type> row_idxs);
356 
364  void resize(dim<2> new_size, size_type nnz);
365 
366  void apply_impl(const LinOp* b, LinOp* x) const override;
367 
368  void apply_impl(const LinOp* alpha, const LinOp* b, const LinOp* beta,
369  LinOp* x) const override;
370 
371  void apply2_impl(const LinOp* b, LinOp* x) const;
372 
373  void apply2_impl(const LinOp* alpha, const LinOp* b, LinOp* x) const;
374 
375 private:
376  array<value_type> values_;
377  array<index_type> col_idxs_;
378  array<index_type> row_idxs_;
379 };
380 
381 
382 } // namespace matrix
383 } // namespace gko
384 
385 
386 #endif // GKO_PUBLIC_CORE_MATRIX_COO_HPP_
gko::matrix::Csr
CSR is a matrix format which stores only the nonzero coefficients by compressing each row of the matr...
Definition: matrix.hpp:30
gko::matrix::Coo::get_col_idxs
index_type * get_col_idxs() noexcept
Returns the column indexes of the matrix.
Definition: coo.hpp:176
gko::LinOp
Definition: lin_op.hpp:117
gko::matrix::view::coo
Non-owning view of a matrix::Coo to be used inside device kernels.
Definition: device_views.hpp:63
gko::matrix::Dense
Dense is a matrix format which explicitly stores all values of the matrix.
Definition: dense_cache.hpp:28
gko::DiagonalExtractable
The diagonal of a LinOp implementing this interface can be extracted.
Definition: lin_op.hpp:701
gko::matrix::Coo::read
void read(const mat_data &data) override
Reads a matrix from a matrix_data structure.
gko::matrix::Coo::compute_absolute
std::unique_ptr< absolute_type > compute_absolute() const override
Gets the AbsoluteLinOp.
gko::matrix::Coo::get_const_col_idxs
const index_type * get_const_col_idxs() const noexcept
Returns the column indexes of the matrix.
Definition: coo.hpp:185
gko::Transposable
Linear operators which support transposition should implement the Transposable interface.
Definition: lin_op.hpp:392
gko::size_type
std::size_t size_type
Integral type used for allocation quantities.
Definition: types.hpp:101
gko::matrix::CooBuilder
Definition: coo.hpp:29
gko
The Ginkgo namespace.
Definition: abstract_factory.hpp:19
gko::array< value_type >
gko::dim< 2 >
gko::matrix_data
This structure is used as an intermediate data type to store a sparse matrix.
Definition: matrix_data.hpp:126
gko::matrix::Coo::get_num_stored_elements
size_type get_num_stored_elements() const noexcept
Returns the number of elements explicitly stored in the matrix.
Definition: coo.hpp:214
gko::matrix::Coo::get_const_device_view
const_device_view get_const_device_view() const
Returns a non-owning const device view of this matrix.
gko::ptr_param
This class is used for function parameters in the place of raw pointers.
Definition: utils_helper.hpp:43
gko::matrix::Coo::write
void write(mat_data &data) const override
Writes a matrix to a matrix_data structure.
gko::array::get_data
value_type * get_data() noexcept
Returns a pointer to the block of memory used to store the elements of the array.
Definition: array.hpp:686
gko::ReadableFromMatrixData
A LinOp implementing this interface can read its data from a matrix_data structure.
Definition: lin_op.hpp:564
gko::matrix::Coo::apply2
void apply2(ptr_param< const LinOp > b, ptr_param< LinOp > x)
Applies Coo matrix axpy to a vector (or a sequence of vectors).
gko::WritableToMatrixData
A LinOp implementing this interface can write its data to a matrix_data structure.
Definition: lin_op.hpp:619
gko::matrix::Coo::get_values
value_type * get_values() noexcept
Returns the values of the matrix.
Definition: coo.hpp:157
gko::next_precision
typename detail::find_precision_impl< T, step >::type next_precision
Obtains the next move type of T in the singly-linked precision corresponding bfloat16/half.
Definition: math.hpp:465
gko::matrix::Coo::transpose
std::unique_ptr< LinOp > transpose() const override
Returns a LinOp representing the transpose of the Transposable object.
gko::previous_precision
typename detail::find_precision_impl< T, -step >::type previous_precision
Obtains the previous move type of T in the singly-linked precision corresponding bfloat16/half.
Definition: math.hpp:472
gko::EnableCloneable
This mixin is used to enable a default Cloneable::clone() implementation and similar for objects that...
Definition: polymorphic_object.hpp:376
gko::matrix::Coo::get_const_row_idxs
const index_type * get_const_row_idxs() const noexcept
Definition: coo.hpp:204
gko::ConvertibleTo
ConvertibleTo interface is used to mark that the implementer can be converted to the object of Result...
Definition: polymorphic_object.hpp:147
gko::matrix::Coo::compute_absolute_inplace
void compute_absolute_inplace() override
Compute absolute inplace on each element.
gko::matrix::Coo::conj_transpose
std::unique_ptr< LinOp > conj_transpose() const override
Returns a LinOp representing the conjugate transpose of the Transposable object.
gko::matrix::Coo::validate_data
void validate_data() const override
Throws gko::InvalidData exception if we found the data inside the object does not fulfill certain pro...
gko::Executor
The first step in using the Ginkgo library consists of creating an executor.
Definition: executor.hpp:615
gko::matrix::Hybrid
HYBRID is a matrix format which splits the matrix into ELLPACK and COO format.
Definition: coo.hpp:32
gko::matrix::Coo::extract_diagonal
std::unique_ptr< Diagonal< ValueType > > extract_diagonal() const override
Extracts the diagonal entries of the matrix into a vector.
gko::array::get_const_data
const value_type * get_const_data() const noexcept
Returns a constant pointer to the block of memory used to store the elements of the array.
Definition: array.hpp:695
gko::matrix::Coo::get_const_values
const value_type * get_const_values() const noexcept
Returns the values of the matrix.
Definition: coo.hpp:166
gko::matrix::Coo::create_const
static std::unique_ptr< const Coo > create_const(std::shared_ptr< const Executor > exec, const dim< 2 > &size, gko::detail::const_array_view< ValueType > &&values, gko::detail::const_array_view< IndexType > &&col_idxs, gko::detail::const_array_view< IndexType > &&row_idxs)
Creates a constant (immutable) Coo matrix from a set of constant arrays.
gko::EnableAbsoluteComputation
The EnableAbsoluteComputation mixin provides the default implementations of compute_absolute_linop an...
Definition: lin_op.hpp:752
gko::matrix::Coo::get_device_view
device_view get_device_view()
Returns a non-owning device view of this matrix.
gko::matrix::Coo::get_row_idxs
index_type * get_row_idxs() noexcept
Returns the row indexes of the matrix.
Definition: coo.hpp:195
gko::array::get_size
size_type get_size() const noexcept
Returns the number of elements in the array.
Definition: array.hpp:669
gko::remove_complex
typename detail::remove_complex_s< T >::type remove_complex
Obtain the type which removed the complex of complex/scalar type or the template parameter of class b...
Definition: math.hpp:263
gko::device_matrix_data
This type is a device-side equivalent to matrix_data.
Definition: device_matrix_data.hpp:36
gko::matrix::Coo::create
static std::unique_ptr< Coo > create(std::shared_ptr< const Executor > exec, const dim< 2 > &size=dim< 2 >{}, size_type num_nonzeros={})
Creates an uninitialized COO matrix of the specified size.
gko::LinOp::LinOp
LinOp(const LinOp &)=default
Copy-constructs a LinOp.
gko::to_complex
typename detail::to_complex_s< T >::type to_complex
Obtain the type which adds the complex of complex/scalar type or the template parameter of class by a...
Definition: math.hpp:282
gko::matrix::Coo
COO stores a matrix in the coordinate matrix format.
Definition: coo.hpp:49